Tatiana Zaraiskaya

Public Service e-Science Librarian (term)
physics
biochemistry
biophysics
solid-state NMR
MRI
Molecular Dynamics simulations using HPC
Master of Science in Library and Information Science (MSLIS) The University of Western Ontario (2015)

Ph.D. University of Guelph
Dissertation: Molecular Dynamics Simulations and 2H NMR Study of a Lipid Bilayer (2004)

Master of Science in biophysics Brock University
Dissertation: Effect of the position of the double-bond in monounsaturated phospholipids on the dynamics of model membranes (1999)


TEACHING:
Sessional course instructor:

BCHM/BIOL 4P03/5P03 "Current topics in Photobiology" Department of Biological Sciences, Brock University, St Cath ON Sept-Dec 2010-2014

PHYS 4D06 "Digital Logic and Computer Systems" Medical Physics & Applied Radiatin Sciences Department, McMaster University, Hamilton ON Jan 2008-April 2009

Conference presentations:

Zaraiskaya, T. Vassiliev S and Bruce D. Exploring the Energetics of Water and Oxygen Permeation in Photosystem II by Multiple Steered Molecular Dynamics Simulations and Implicit Ligand Sampling. Sharcnet Research Day, University of Guelph, ON May 23, 2012.

Zaraiskaya, T., Kumbhare, D. and Noseworthy, M. Magnetic resonance findings and serum creatine kinase measurements in acute human skeletal injury. Proc. ISMRM 14-th meeting, Seattle, USA, May 6-12, 2006.

Zaraiskaya, T., and Noseworthy, M. Application of diffusion tensor imaging (DTI) and tractography in the analysis of human skeletal muscle tears. Proc. ESMRMB, 22-nd meeting, Basle, Switzerland, Sept 15-18, 2005.

Zaraiskaya, T. and K. Jeffrey. Characterization of the GalCer/DPPG lipid bilayer in a collapsed and an expanded states based on MD simulation and 2H NMR experiments. 48th Biophysical Society Annual Meeting. Baltimore, MD, USA, February 14-18, 2004. (PhD work)

Zaraiskaya, T. and K. Jeffrey. Molecular dynamics simulation of the lipid bilayer. SHARCNET annual meeting, University of Guelph, ON, Canada 2003. (PhD work)

Zaraiskaya, T. and K. Jeffrey. Interactions between cerebroside bilayers: 2H NMR study. 14th MOOT NMR symposium, University of Sherbrooke, Quebec, Canada 2001. (PhD work)

Zaraiskaya, T. and E. Sternin. Effect of the position of the double bond in mono-unsaturated phospholipids on the dynamics of model membranes. 40th ENC, Orlando, FL, USA 1999. (MSc work)

Zaraiskaya, T. and S. Gurevich. Optical properties of the nanometer size copper particles in SiO2 thin films. Proceedings of the European Conference for PhD students in Physical Sciences. Nice, France, July 1995.(BSc work)

Zaraiskaya T. Vassiliev, S. and Bruce, D. Discovering oxygen channel topology in photosystem II using implicit ligand sampling and wavefront propagation. Journal of Computational Science, 5(3): 549-555, 2014.

Vassiliev, S., Zaraiskaya T. and Bruce, D. Molecular dynamics simulations reveal highly permeable oxygen exit channels shared with water uptake channels in Photosystem II. - Biochimica et Biophysica Acta – Bioenergetics, 1827(10): 1148-55, 2013.

Vassiliev, S. Zaraiskaya, T and Bruce, D. Exploring the energetic of water permeation in Photosystem II by multiple steered molecular dynamics simulations. BBA, v.1817(9), 1671-1678, Sept 2012.

Zaraiskaya, T. Kumbhare, D. and Noseworthy, M. Diffusion tensor imaging in evaluation of human skeletal muscle injury. JMRI. 24(2), 402-408, 2006.

Sternin, E, T. Zaraiskaya., R.Razavi, and R. Epand. Changes in molecular order across the lamellar-to-inverted hexagonal phase transition depend on the position of the double-bond in mono-unsaturated phospholipid dispersions. Chem Phys Lipids.140, 98-108, 2006.

Zaraiskaya, T. and K. Jeffrey. Molecular dynamics simulation of the GalCer/DPPG lipid bilayer in the liquid crystalline phase. Biophys. J. 88(6), 4017-4031, 2005.

Kolobov, A., H. Oyanagi, S. Gurevish, T. Zaraiskaya, V. Horenko, V. Poborchii, and K. Tanaka. Structure of inorganic nano-clusters embedded in solid matrixes: an X-ray absorption study. Z. Phys. D. 40:520, 1997.

Kolobov, A.V., H. Oyanagi, S. Gurevish, T. Zaraiskaya, V. Horenko and K. Tanaka. The formation of copper nanoclusters in SiO2 studied by X-ray absorption spectroscopy. J. Surf. Analysis 3:486, 1997.

Gurevish, S., V. Horenko, T. Zaraiskaya and S. Vyshenski. Room temperature coulomb fingerprints in thin films of Cu-SiO2 composite material Cu-SiO2. JETP Lett. 64:736, 1996.

Kolobov, A., H. Oyanagi, S. Gurevish, T. Zaraiskaya, V. Horenko, V. Poborchii, and K. Tanaka. Structure of inorganic nano-clusters embedded in solid matrixes: an X-ray absorption study. Z. Phys. D. 40:520, 1997.

Kolobov, A.V., H. Oyanagi, S. Gurevish, T. Zaraiskaya, V. Horenko and K. Tanaka. The formation of copper nanoclusters in SiO2 studied by X-ray absorption spectroscopy. J. Surf. Analysis 3:486, 1997.

Gurevish, S., V. Horenko, T. Zaraiskaya and S. Vyshenski. Room temperature coulomb fingerprints in thin films of Cu-SiO2 composite material Cu-SiO2. JETP Lett. 64:736, 1996.

Contact

Douglas Library
Room 519
(613) 533-6000 x78770